User: sara.dandreano

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Posts by sara.dandreano

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Comment: C: fastx toolkit problem: fastq to fasta
... Dear h.mon, Thank you for the suggestion, I will try with the Phred+33! best regards Sara ...
written 11 months ago by sara.dandreano0
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Comment: C: fastx toolkit problem: fastq to fasta
... Dear genomax, thank you for your reply, I already tried the -Q33 as it was written in another question I saw on Biostars but it was not working. I will try the Phred+33 as h.mon suggests. Thank you very much!! ...
written 11 months ago by sara.dandreano0
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Comment: A: fastx toolkit problem: fastq to fasta
... Hi all, I'm trying to use the command "fastq_to_fasta" on fastq files from MinION run (Nanopore technologies) because I need a fasta.file to go on with data analysis. When I run the command "*fastq_to_fasta -i fileNanopore.fastq -o .fileNanopore.fasta*" I got this error: *fastq_to_fasta: Error: inva ...
written 11 months ago by sara.dandreano0
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Comment: C: DADA2 vs DEBLUR
... arsilan324 Really thank you for your reply!!!!! ...
written 2.1 years ago by sara.dandreano0
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Comment: A: DADA2 vs DEBLUR
... Thank you for your reply! I obtained my sequencing data from IonTorrent and I'm sequencing the 16S gene. As I'm not an expert of DADA2 and Deblur, I asked opinions about them to understand if both were fine for these analysis!! ...
written 2.1 years ago by sara.dandreano0
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DADA2 vs DEBLUR
... Hi all! I'm a PhD student working on Microbiome and Mycobiome in skin dog! I'm learning how to use QIIME2 for sequences analysis. I saw that in QIIME2 you can use or DADA2 or Deblur for the analysis, and my question is: what do you think about them?? which one is better? Thank you very much, any ...
sequence next-gen sequencing written 2.1 years ago by sara.dandreano0 • updated 2.1 years ago by arsilan32480

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Popular Question 2.0 years ago, created a question with more than 1,000 views. For DADA2 vs DEBLUR

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