User: hewm2008

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hewm200810
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2 months ago
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Posts by hewm2008

<prev • 3 results • page 1 of 1 • next >
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Answer: A: Calculation of LD decay value in GWAS
... Here, I introduce [PopLDdecay](https://github.com/BGI-shenzhen/PopLDdecay ), a simple- efficient software for LD decay analysis, which processes the Variant Call Format VCF5 file to produce the LD decay statistics results and plot the LD decay graphs. The simple used : ./bin/PopLDdecay -InVC ...
written 5 months ago by hewm200810
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Answer: A: LD-decay in a r2 vs distance(cm) plot
... I thinks this software(PopLDdecay) can help you to draw LDdecay Figure directly, https://github.com/BGI-shenzhen/PopLDdecay The simplest usage ./bin/PopLDdecay -InVCF SNP.vcf.gz -OutStat LDdecay [#other para: -SubPop GroupA_sample.list] perl bin/Plot_OnePop.pl -inFile LDdecay ...
written 6 months ago by hewm200810
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Answer: A: How To Split A Bam File By Chromosome
... This soft can help all of you https://github.com/BGI-shenzhen/BamSplit ...
written 8 months ago by hewm200810

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