User: bushrasiraj52

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Posts by bushrasiraj52

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Comment: C: CD-Hit running problem
... Alright I had given arguement -c specifying sequence identity threshold. Can you tell me what is the next step to do ?? as my further step is to do blastp against human genome to get non-homologous sequences .. how to correlate with the output of cd-hit to the blastp ?? ...
written 6 months ago by bushrasiraj520
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CD-Hit running problem
... how will we get know about the removal of paralogous sequences by running CD-Hit ?? how can we identify paralogous sequences from output ftext files of list of clusters ?? ...
sequencing written 6 months ago by bushrasiraj520 • updated 6 months ago by Sej Modha3.4k
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Comment: C: Autodock vina problem
... every time Autodock and autodock vina is run we get different binding energy score but the ligand binding position and its mode will remain same. ...
written 6 months ago by bushrasiraj520
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to perform vina against a database of ligands
... I have 30000 compounds as ligands which I have to check against one receptor. How would I program vina to to run them altogether without manually writing a config file for each ligand to be docked. Any specific comman available using vina ?? ...
software error written 6 months ago by bushrasiraj520 • updated 6 months ago by amitunited05320
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(Closed) installing google chrome in linux
... hello!! I downloaded google chrome in rpm format for opensuse linux-64 version but when I tried to install it by using command rpm -ivh google-chrome-stable_current_x86_64.rpm it gave an error everytime is as follows: warning: google-chrome-stable_current_x86_64.rpm: Header V4 DSA/SHA1 Signature, k ...
software error written 6 months ago by bushrasiraj520

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