User: bari.ballew

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Answer: A: From pooled fastq data to SNPs
... You probably want to check out Broad's best practices (https://software.broadinstitute.org/gatk/best-practices/). Specifically, look mainly at the sections on data pre-processing and germline SNPS+indels. Alternatively, you could check out the bcbio pipeline (http://bcbio-nextgen.readthedocs.io/en ...
written 12 months ago by bari.ballew0

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