User: fuellen

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fuellen10
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Posts by fuellen

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Trouble with Cyclin D3 in the Golub dataset
... Dear ALL, Many of you will be aware of the Golub et al data, one of the first high-throughput gene expression datasets ever, used for teaching in many places. I recently noticed that for one of the genes, the expression pattern in their famous figure does not seem to match the underlying data (as t ...
R gene expression written 6 months ago by fuellen10
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google/pubmed searches including all synonyms (that was possible at ihop)
... Hello, 1) For a couple of weeks, ihop (http://www.ihop-net.org/), "Information Hyperlinked over Proteins" seems down, does anyone have details? 2) ihop offered to start pretty straightforward google/pubmed searches including all the synonyms of a gene into the search phrase, connected by "OR", to ...
synonyms ihop written 8 months ago by fuellen10
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Best way to obtain a keyword-guided overview of gene expression for a small gene set?
... Hello, I'm looking for a tool (best if it's easy to use over the web), where I can provide a small set of genes (e.g. 10 HUGO gene names) and a keyword as input, and the output is a table of expression values of these genes for as many publicly available gene expression datasets as possible that are ...
gene expression written 9 months ago by fuellen10
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gene expression anti-correlation data?
... Hello, I'd like to know, for a set of tissues if possible, whether two genes are anti-correlated (gene A up implying gene B down and vice versa), in NGS datasets and, more generally, in any gene expression datasets. While there are plenty of tools for coexpression (correlation both ways, or just pos ...
gene expression written 17 months ago by fuellen10

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