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Posts by joldare
Answer: A: Kaplan Meier Hazard Ratio
... You can use TCGABiolinks package for this purpose. here is a good article about it [link] : https://bioc.ism.ac.jp/packages/3.2/bioc/vignettes/TCGAbiolinks/inst/doc/tcgaBiolinks.html ...
... [David] and [Enrichr] are very powerful tools. Enrichr checks many databases but also you can chackout [KEGG] and [Reactome] directly too. both of them have visualisation. KEGG's data is provided manually and it is more reputable. : https://david.ncifcrf.gov/ : http://amp.pha ...
... Hello, I have a normalized miRNA data matrix of 6 groups. every group has 3 samples. density plot of each sample is: ![density plot] I have no access to the raw count data. So for analysing this matrix I used limma package. But results I get are not as it must be (based on the corresponding pape ...
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