User: ishackm

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ishackm70
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Posts by ishackm

<prev • 70 results • page 1 of 7 • next >
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Comment: C: How to calculate overlap of peptides between different categories to create Ven
... Hi SMK , thank you again for your quick response. Much Appreciated. ...
written 3 days ago by ishackm70
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Comment: C: How to calculate overlap of peptides between different categories to create Ven
... Hi SMK, sorry for the lateness, is there a way to see the number of unique peptides from each category when there are blanks in columns, please? the `length code` sees the blank cells as unique peptides, unfortunately. ...
written 3 days ago by ishackm70
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Comment: C: How to calculate overlap of peptides between different categories to create Ven
... Hi SMK, Thanks very much for your quick response, I have been trying all day to fix this. You are a life saver! ...
written 13 days ago by ishackm70
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Comment: C: How to calculate overlap of peptides between different categories to create Ven
... Hi SMK, Unfortunately, I found just now that I can't do a Venn diagram for more than 5 categories. Can you help me create a df that looks like this please? TGE-Class Count T1 1 T2 1 Both 6 Thanks very much ...
written 13 days ago by ishackm70
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Comment: C: How to calculate overlap of peptides between different categories to create Ven
... Hi, Unfortunately, I found just now that I can't do a Venn diagram for more than 5 categories. Can you help me create a df that looks like this please? TGE-Class Count T1 1 T2 1 Both 6 Thanks very much ...
written 13 days ago by ishackm70
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Comment: C: How to apply a function on a list of dataframes with a for loop in R?
... Thanks for replying, that removed the error but how to apply the function for each element in tge1 list and export each one as csv please? The output when I changed to names(tge1) [1] "ABI3BP" [1] "AEBP1" [1] "AGRN" ...
written 14 days ago by ishackm70
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How to apply a function on a list of dataframes with a for loop in R?
... Hi everyone, I have this list of data frames: $ABI3BP Gene.Name TGEClass peptide ID 150588 ABI3BP TGEClass=5prime_extended IYLSDSLTGK 150588 150589 ABI3BP TGEClass=5prime_extended VSEPVSAGR 150589 150590 ABI3 ...
R export csv for loop written 14 days ago by ishackm70
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Comment: C: How to calculate overlap of peptides between different categories to create Ven
... Thanks very much for your quick response ...
written 16 days ago by ishackm70
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Comment: C: How to calculate overlap of peptides between different categories to create Ven
... Sorry for the late reply, this is the csv I am using: T2 T3 QHDMGHMMR QHDMGHMMR RPGGEPSPEGTTGQSYNQYSQR RPGGEPSPEGTTGQSYNQYSQR KTDELPQLVTLPHPNLHGPEILDVPSTVQK KTDELPQLVTLPHPNLHGPEILDVPSTVQK HRPRPYPPNVGEEIQIGHIPR HRPRPYPPNVGEEIQIGHIPR QHDMGHMMR QHDMGHMMR DQCIVDDITYNVNDTFHK ...
written 16 days ago by ishackm70
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Comment: C: How to calculate overlap of peptides between different categories to create Ven
... Hi, I ran the code you gave me but it is giving me an error: df = read.csv("FN1.csv") FN1 = as.vector(df) library(data.table) x <- dcast(cbind(stack(as.list(FN1)), x = TRUE), values ~ ind, ...
written 16 days ago by ishackm70

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