User: eDNAuRNA

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eDNAuRNA20
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6 months, 3 weeks ago
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2 years, 6 months ago
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Posts by eDNAuRNA

<prev • 16 results • page 1 of 2 • next >
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Replace a special character with another one in a string using Linux regex
... Hi everyone, I am trying to replace the first period by a hyphen in following strings by using regex `(?<=\d\d)\.` 12345.678910-68597-19_A250_M007_001_1_1.abcde.fg I am using `sed` command as `sed 's/(?<=\d\d)\./-/'` To make the output as follows: 12345-678910-68597-19_A250_M007_001 ...
linux regex written 6 months ago by eDNAuRNA20
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Comment: A: Download all files from a web directory which requires login ID and password by
... Thanks a lot Alex. For getting the list of links, can we have a solution in Linux? ...
written 8 months ago by eDNAuRNA20
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Download all files from a web directory which requires login ID and password by using command line (Linux).
... I have a web directory which requires login and password for access. I need to download multiple data files from the web directory by using linux command line but I don't know how to get the web links to all files in the directory as well as how to use a list of web links in `wget` command. Any hel ...
web directory linux written 8 months ago by eDNAuRNA20
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Comment: C: Comparing values of a column if it falls between values of two columns of a diff
... I accepted answer for the example data given. However, I am still struggling with the real data. ...
written 11 months ago by eDNAuRNA20
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Comment: C: Comparing values of a column if it falls between values of two columns of a diff
... Hey Kevin, I am trying to do it in R as well but I think there is a common problem which is causing this not to work with real dataset. My apologies. With example data it works on Mac but its not working with real dataset. I realized that the real dataset has many regions in `A.txt` which doesn't ov ...
written 11 months ago by eDNAuRNA20
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Comment: C: Comparing values of a column if it falls between values of two columns of a diff
... My apologies. You are absolutely right. With example data it works 100%. But its not working with real dataset. I realized that the real dataset has many regions in `A.txt` which doesn't overlap with the `B.txt`. Please note that in real dataset, `A.txt` has about 10,000 rows while B.txt has about ...
written 11 months ago by eDNAuRNA20
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Comment: C: Comparing values of a column if it falls between values of two columns of a diff
... Didn't work. "*Error in setkeyv(B, c("V2", "V3")) : some columns are not in the data.table: V2*" Thanks though. ...
written 11 months ago by eDNAuRNA20
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Comment: C: Comparing values of a column if it falls between values of two columns of a diff
... I am using RedHat Enterprise Linux 7 and yes the files are tab -delimited. Will it work on mac? Thanks for the help again. Really appreciate and looking forward to solve this problem. ...
written 11 months ago by eDNAuRNA20
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Comment: C: Comparing values of a column if it falls between values of two columns of a diff
... Thanks Rashedul, however bedtools might not work because of redundancy. ...
written 11 months ago by eDNAuRNA20
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Comment: A: Comparing values of a column if it falls between values of two columns of a diff
... Thanks Kevin, That was quick. I tried but it didn't work for me, that's weird. I have exact same data sets and i copied your code. It didn't reproduce the product you have shown. Can you please take another look? Your all assumptions are correct except one thing I would like to clarify that I also ...
written 11 months ago by eDNAuRNA20

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