User: ludwig.geistlinger

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Posts by ludwig.geistlinger

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Answer: A: Converting Reactome SMBL/Biopax to KGML format (mainly for EnrichmentBrowser)
... Hi, I have added the new `compileGRN` function which supports KEGG, Reactome, Biocarta, and NCI for human. For a number of additional model organisms there is also support for Reactome (in addition to KEGG, of course). You can install the new version of the `EnrichmentBrowser` package (2.9.14) usi ...
written 14 months ago by ludwig.geistlinger20
1
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3
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590
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3
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Answer: A: Converting Reactome SMBL/Biopax to KGML format (mainly for EnrichmentBrowser)
... Hi Nguyen, I'm currently working on a general `compileGRN` function that will allow to compile a gene regulatory network also from other pathway databases than KEGG (including Reactome, Biocarta, Humancyc, NCI, and Panther). This function will become available in the `devel` version of the `Enrich ...
written 14 months ago by ludwig.geistlinger20

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