User: anand.gururajan

Reputation:
0
Status:
New User
Last seen:
2 months, 1 week ago
Joined:
2 years, 7 months ago
Email:
a**************@sydney.edu.au

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by anand.gururajan

<prev • 4 results • page 1 of 1 • next >
0
votes
0
answers
143
views
0
answers
Plotting summary Log2FC - Group A v B
... Hi. I've generated some RNA-seq data and have my list of DE genes between two groups and fold-changes (log2FC). I'd like to be able to plot a summary heatmap of log2FC for this group comparison in a single bar similar to the one in this paper for [Figure4A][1]. Would anyone happen to know ideas o ...
ggplot log2fc rna-seq singlebarheatmap written 10 weeks ago by anand.gururajan0 • updated 10 weeks ago by ATpoint41k
0
votes
0
answers
308
views
0
answers
DEXSeq output from Galaxy
... Hi everyone. I'm new to using DEXSeq on Galaxy and had a question about the format of the output. From the description on the Galaxy tool, the format of the results file has 14 standard column headings plus unlabelled columns for the samples being compared. Exon usage level coefficients are reported ...
dexseq galaxy written 13 months ago by anand.gururajan0 • updated 13 months ago by WouterDeCoster44k
0
votes
0
answers
565
views
0
answers
Identifying pri-microRNA sequence from microRNA sequence
... Hi all. Given miRNA-seq data, is there a way to bioinformatically predict the sequence of the pri-miRNAs? Does anyone reference to a paper with an algorithm (in R or python) for doing this? And lastly, has anyone experimentally validated that a specific pri-miRNA produces a specific miRNA? Than ...
rna-seq microrna written 2.0 years ago by anand.gururajan0 • updated 10 months ago by Biostar ♦♦ 20
0
votes
1
answer
917
views
1
answer
Modular differential connectivity
... Hi. Using RNA-seq data, i've managed to generate modules using WGCNA that are unique to specific experimental groups. This was using the tutorial on the UCLA website. I'm now trying to look at connectivity within a module. I have access to the R script (https://www.rdocumentation.org/packages/DGC ...
R rna-seq written 2.6 years ago by anand.gururajan0 • updated 2.6 years ago by Kevin Blighe67k

Latest awards to anand.gururajan

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1188 users visited in the last hour