User: StudentBio

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StudentBio0
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Posts by StudentBio

<prev • 30 results • page 1 of 3 • next >
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problem to generate p3in input file for primer3
... hello please i need your help i want generate input file for primer3 for SSR(MISA) this is my command: perl p3_in.MAG.pl genome.fasta.misa and i got this error in my shell, > Use of uninitialized value $count in concatenation (.) or string at p3_in.MAG.pl line 37, chunk 50655. ...
misa p3in primer written 9 months ago by StudentBio0 • updated 9 months ago by h.mon26k
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Comment: C: build databses for genome using snpEff
... #phoenix dactylifera dpv01.genome : phoenix_dactylifera ...
written 11 months ago by StudentBio0 • updated 11 months ago by finswimmer11k
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Comment: C: build databses for genome using snpEff
... java -jar snpEff.jar build -gff3 -v dpv01 ...
written 11 months ago by StudentBio0 • updated 11 months ago by finswimmer11k
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build databses for genome using snpEff
... hello, please i got this error when i try building a database for date plam genome Total: 363391 markers added. Create exons from CDS (if needed): ..................................................................+.................................................................. ...
annotation snpeff snp written 11 months ago by StudentBio0 • updated 11 months ago by finswimmer11k
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Comment: C: efficient tool for annotate variant in phoenix dactylifera
... I wanted to try ANNOVAR but I can not download it ...
written 12 months ago by StudentBio0
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efficient tool for annotate variant in phoenix dactylifera
... hello please i try to annotate variants in the vcf file for phoenix dactylifera and I don't know which tool is more efficient for plants ...
vcf annotation snp plant written 12 months ago by StudentBio0
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Comment: C: solution for SPades to assemble genome with low quality data
... my file is 14 GB single-cell want mean it seems that i don t understand it ...
written 12 months ago by StudentBio0
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Comment: C: solution for SPades to assemble genome with low quality data
... 50 and quality score for position in reads are betweeen 28 and 20 after trimming ...
written 12 months ago by StudentBio0
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Comment: C: solution for SPades to assemble genome with low quality data
... 50 and quality score for position in reads are betweeen 28 and 20 after trimming ...
written 12 months ago by StudentBio0
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solution for SPades to assemble genome with low quality data
... hello the community when I run spades with this command: inra@inra-VirtualBox:~/SPAdes-3.5.0-Linux/bin$ ./spades.py --sc -m 4 --iontorrent -k 21,33,55,77,99,127 -s /home/inra/share/outils/trimmed.fastq -o /home/inra/share/spades i get this error, please any suggestions, i have single-reads fro ...
assembly ion-torrent spades single-end written 12 months ago by StudentBio0 • updated 12 months ago by Sej Modha4.2k

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