User: Za

gravatar for Za
Za90
Reputation:
90
Status:
Trusted
Location:
Last seen:
20 hours ago
Joined:
5 months ago
Email:
i********@yahoo.com

Posts by Za

<prev • 152 results • page 1 of 16 • next >
0
votes
1
answer
149
views
1
answers
Comment: C: Colouring cells by ggplot2
... You definitely you alright. Honestly, biostars is always my bests way of documentation for solutions for similar questions in future because I would always refer to my posts in near future. But believe me I am posting my question firstly here as I don't have any hope that I would find the solution m ...
written 9 days ago by Za90
0
votes
1
answer
96
views
1
answers
Comment: C: Why quantitative design are preferred GWAS approach
... Actually I also don't know deeply but I only know quantitative data can be model and tested with more flexibility , I am sorry :( ...
written 9 days ago by Za90
3
votes
1
answer
149
views
1
answers
Answer: A: Colouring cells by ggplot2
... p+geom_point(alpha=.3)+scale_x_discrete(limits=as.factor(data$cell)) ...
written 9 days ago by Za90 • updated 9 days ago by RamRS17k
0
votes
1
answer
96
views
1
answers
Comment: C: Why quantitative design are preferred GWAS approach
... I think one reason could be quantitative traits follow certain distribution like normal distribution so they could be statistically tested against the null hypothesis for example t student test while qualitative traits usually have to be tested by non parametric tests as these data don't follow cert ...
written 9 days ago by Za90
5
votes
1
answer
149
views
1
answer
Colouring cells by ggplot2
... In this graph 81 cells have being ordered by pseudo time. For example cell s0.76 has been placed at the start of pseudo time and cell s0.11 placed at the end of pseudo time. ![enter image description here][1] This is the expression profile of this gene on this pseudo time > Data s0.76 ...
R ggplot2 written 9 days ago by Za90
0
votes
1
answer
208
views
1
answers
Comment: C: Removing some character from Seurat metadata
... I did as you kindly suggested as below > md = immune.combined@meta.data > > rownames(md) = gsub("^_", "", rownames(md)) > head(md) nGene nUMI orig.ident res.0.7 CELL STAGE GENO dataset stage.nice celltype var.ratio.pca res.0.6 s1.1 4331 373762 Se ...
written 26 days ago by Za90
0
votes
0
answers
262
views
0
answers
Comment: C: Finding repository of codes for these papers
... This is the link of used codes in their paper but impossible for me to understand that :( https://www.dropbox.com/sh/zn9b5xgssmkhnqa/AACJucOyiLcs-1WOmwerQyf3a/Subroutines?dl=0&subfolder_nav_tracking=1 ...
written 27 days ago by Za90
2
votes
1
answer
208
views
1
answer
Removing some character from Seurat metadata
... Hi, My Seurat metadata looks so > head(immune.combined@meta.data) nGene nUMI orig.ident res.0.7 CELL STAGE GENO dataset stage.nice celltype var.ratio.pca res.0.6 _s1.1 4331 373762 SeuratProject 0 s1.1 H16 WT 1 H16 0 1.8560791 1 ...
software error R cellrouter seurat metadata written 27 days ago by Za90 • updated 27 days ago by Santosh Anand3.9k
0
votes
1
answer
114
views
1
answers
Comment: C: Error in GraphClustering function
... Excuse me, could you please tell me how URD:: solved the error? Thank you again ...
written 28 days ago by Za90
0
votes
1
answer
114
views
1
answers
Comment: C: Error in GraphClustering function
... Thanks a lot, after long time worked. I two times emailed the developers but finally you solved that > object <- URD::graphClustering(axial.6somite, num.nn = c(5,8,10,15), method="Louvain", do.jaccard = TRUE) > Thank you so much once again ...
written 29 days ago by Za90

Latest awards to Za

Scholar 9 days ago, created an answer that has been accepted. For A: Colouring cells by ggplot2
Teacher 9 days ago, created an answer with at least 3 up-votes. For A: Colouring cells by ggplot2
Voter 7 weeks ago, voted more than 100 times.
Centurion 11 weeks ago, created 100 posts.
Rising Star 3 months ago, created 50 posts within first three months of joining.
Supporter 4 months ago, voted at least 25 times.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1386 users visited in the last hour