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Posts by kjkjindal
... Hi, DESeq uses the following model for differential expression analysis: K_ij ~ NB(mu_ij, alpha_i) mu_ij = s_j q_ij log2(q_ij) = x_j. beta_i Is there a way to access the specific 'mu_ij' and 'alpha_i' values? I have been looking around and found **assays(dds)[['mu']]** giving something like mu ...
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