User: 112498262

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1124982620
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Posts by 112498262

<prev • 17 results • page 1 of 2 • next >
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Comment: C: Combine paired-end fastq files
... Thank you so much. I used [interleave-fastq][1], it worked a charm :) [1]: https://github.com/ekg/interleave-fastq/blob/master/interleave-fastq ...
written 3 months ago by 1124982620
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Combine paired-end fastq files
... I am trying to use [SCARPA][1] for scaffolding. I have been given two separate paired-end fastq files, one containing each forward read and the second containing the corresponding reverse reads. SCARPA requires the read data to be in a single fastq format, whereby the forward and reverse read of eac ...
next-gen sequencing written 3 months ago by 1124982620 • updated 3 months ago by genomax70k
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Where to download the BAGEL4 software?
... Is it possible to download the [BAGEL4][1] software for loacal use? Thanks [1]: http://bagel4.molgenrug.nl/ ...
gene written 3 months ago by 1124982620
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Comment: C: Is there a BlastKOALA local installation?
... The structure and availability of data on the Sanger ftp site has changed so KAAS SA doesn't configure correctly. ...
written 5 months ago by 1124982620
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Comment: C: kaas standalone installation
... Did you find a solution to this? I am having the same issue. ...
written 5 months ago by 1124982620
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Comment: C: Is there a BlastKOALA local installation?
... Thank you so much :) ...
written 5 months ago by 1124982620
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Is there a BlastKOALA local installation?
... I would like to carry out a whole genome KO annotation of a bacterial genome using BlastKOALA but as far as I can find it is only available as a web service. Is it possible to install BlastKOALA locally or is there an alternative tool that assigns KO numbers? Thanks in advance. ...
genome gene written 5 months ago by 1124982620 • updated 5 months ago by anicet.ebou140
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Comment: C: In silico functional comparison between two strains
... Thanks very much for your help. ...
written 9 months ago by 1124982620
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In silico functional comparison between two strains
... Can anyone suggest a program that can be ran locally for pairwise functional comparison between strains? ...
gene next-gen written 9 months ago by 1124982620 • updated 9 months ago by mike-zx140
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Comment: C: Traitar installation issue
... That's all I have to work with unfortunately. ...
written 9 months ago by 1124982620

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