User: anusblat

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anusblat0
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Posts by anusblat

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Clusters proteins at each taxonomic rank - OMA
... Hello everybody, Anyone knows how to clusters proteins ( for example 90% of sequence identity) at each taxonomic rank (for example phylum) from an orthoXML file downloaded from OMA or other files. This will create non-redundant proteins in all taxomomic rank, but will avoid to loose a phylum that ...
oma clustering written 8 weeks ago by anusblat0 • updated 8 weeks ago by adrian.altenhoff650
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Comment: C: OMA - How to retrieve orthologs of only one representative of each taxonomy rank
... Thanks Christophe, I just read this reply a bit late. Sorry. Do you know if your answer can be done via website? Alejandro ...
written 8 weeks ago by anusblat0
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How export HOG viewer tree with orthologs in OMA
... Hi everybody, Do you know how I can export HOG viewer tree with orthologs in OMA? Using the web interface? Thanks, Alejandro ...
oma orthologs oma ortholog written 23 months ago by anusblat0 • updated 23 months ago by Christophe Dessimoz660
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OMA - How to retrieve orthologs of only one representative of each taxonomy rank?
... Hello everybody? I want to retrieve the ortholog sequences of only one representative of each taxonomy rank (for expample phylum). For example: I have 338 orthologs of the Entry ASPTN10103 (Q0CIE2). I want to download only one (or two or three) representative of any different Phylum. Any one know ...
oma orthologs orthologs oma written 23 months ago by anusblat0 • updated 23 months ago by Christophe Dessimoz660

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