User: Lio04

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Lio040
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Posts by Lio04

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Comment: C: Mutation clustering in protein domains
... I will look into it, thank you very much! ...
written 9 weeks ago by Lio040
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Comment: C: Mutation clustering in protein domains
... Yes, I already used Pfam to retrieve the domain organization of my protein of interest and mapped the mutations onto my protein, so I know where they are located. My question exactly is how to bioinformatically/statistically test clustering to present the results in a more scientific way instead of ...
written 9 weeks ago by Lio040
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Mutation clustering in protein domains
... Hi everyone, Via targeted resequencing, I have identified missense mutations in my gene of interest. These missense mutations are enriched in patients versus control individuals. I made a lolliop plot to visualise where these mutations are located on the protein and to see whether they occur in pro ...
gene protein domain clustering missense mutation written 9 weeks ago by Lio040 • updated 9 weeks ago by Jean-Karim Heriche22k
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Haplotype sharing of mutation carriers
... Hi everyone, I have a question regarding the construction of haplotypes. We have WES data of (unrelated) patients available. In our gene of interest, we found 4 different loss-of-function mutations that are shared by at least 2 patients. So we want to know if the patients who share the same LOF mu ...
haplotype ngs wes snp written 22 months ago by Lio040 • updated 22 months ago by Kevin Blighe60k

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