User: nazza2008

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nazza20080
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Posts by nazza2008

<prev • 5 results • page 1 of 1 • next >
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Comment: C: How to set up Swissprot database for ncbi-blast+ using anaconda
... Do we need to create an environment variable $BLASTDB to point to the directory where we want to store our database? ...
written 9 weeks ago by nazza20080
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Comment: C: Stand alone Blast annotation with multiple databases
... Hello Michael Dondrup, how big is the size of the nr database? I'm trying to blast against SwissProt database only but from your answer above also have to download the nr database. ...
written 9 weeks ago by nazza20080
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How to set up Swissprot database for ncbi-blast+ using anaconda
... Hello, I'm trying to install ncbi-blast+ with SwissProt database using anaconda. I already install the ncbi-blast+ package, how to I setup the database? I'm on ubuntu 18.04 ...
ncbi ubuntu anaconda blast written 9 weeks ago by nazza20080 • updated 9 weeks ago by h.mon23k
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Comment: C: Protein data representation in neural network
... I want to predict the function of ATP transmembrane domain in cystic fibrosis conductance regulator protein. I require to use neural network tools in Matlab. You can say, instead of using blast tools I required to use neural network. ...
written 6 months ago by nazza20080
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Protein data representation in neural network
... Hello, this may sound like a dumb question. I'm trying to predict protein function using the neural network in MATLAB. The question is, what is the data representation of protein should I use for input and output? ...
protein neural network amino acid sequence matlab written 6 months ago by nazza20080 • updated 4 months ago by Biostar ♦♦ 20

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