User: gykajan

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gykajan0
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Posts by gykajan

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Comment: C: Tuning MrBayes - Swapfreq, Nswaps, Nchains, and Temp
... Thanks for the tip, checked it out. It just seems impractical. You have your large dataset, the analysis converges, but takes ages. If it is done already, you don't start to optimise it. Is there any way/hint to set up these values correctly for a large number of chains/cores? ...
written 8 weeks ago by gykajan0
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Tuning MrBayes - Swapfreq, Nswaps, Nchains, and Temp
... Hi, For an alignment containing 1000s of sequences, what is the best setting for Swapfreq, Nswaps, Nchains, and Temp in MrBayes? I am running an MPI version and tried to raise the number of chains (Nchains) each running on a different CPU core. But did not get significant time decrease compared to ...
mrbayes swapfreq nswaps nchains temp written 8 weeks ago by gykajan0 • updated 8 weeks ago by RamRS19k

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