User: lhernanj

gravatar for lhernanj
lhernanj0
Reputation:
0
Status:
New User
Last seen:
1 year, 1 month ago
Joined:
2 years, 1 month ago
Email:
l*******@ull.edu.es

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by lhernanj

<prev • 14 results • page 1 of 2 • next >
0
votes
1
answer
461
views
1
answers
Comment: C: Orthomcl from anaconda, error
... Thanks a lot for your help ATpoint. I am using many conda environments and I did not check my environment was activated because I hide the conda environment name from the prompt. Thanks again for your clear information and your help. greetings laura ...
written 15 months ago by lhernanj0
0
votes
1
answer
461
views
1
answers
Comment: A: Orthomcl from anaconda, error
... orthomcl is installed in my conda environment and I checked it with "conda list", however when I type "which orthomcl", no a location is found. Then orthomcl does not work because something happens when I installed orthomcl from anaconda. Maybe someone has installed orthomcl from anaconda and know ...
written 15 months ago by lhernanj0
1
vote
1
answer
461
views
1
answer
Orthomcl from anaconda, error
... Hi all, I have installed orthomcl from anaconda with "conda install -c bioconda orthomcl" and I have copied the config file to my working directory but orthomcl does not work. I do not know what is the problem, maybe something related to msqyl?. Any idea to fix it. thanks laura ...
orthomcl ortologues written 15 months ago by lhernanj0
0
votes
1
answer
302
views
1
answers
Comment: C: How can I align two proteomes?
... My data are all proteins of a strain and all proteins of another strain. I was looking at Proteinortho and I am going to try it because it seems that I need. However, what software could I use to draw the synteny after using Proteinortho? ...
written 15 months ago by lhernanj0
0
votes
1
answer
302
views
1
answers
Comment: C: How can I align two proteomes?
... I am not sure if that is important but the point is that I did not find any study which uses proteny with prokaryotes and furthermore it was design to detect clusters of "exons" ...
written 15 months ago by lhernanj0
0
votes
1
answer
302
views
1
answers
Comment: C: How can I align two proteomes?
... align all proteins of a strain against all proteins of another strain to get the synteny, that is the objective ...
written 15 months ago by lhernanj0
0
votes
1
answer
302
views
1
answer
How can I align two proteomes?
... Hello all, I want to align two complete proteomes, not proteins. I was thinking to try "proteny" but my proteomes are from bacteria and proteny was used to eukaryotes so I do not know if it is correct to use proteny. Does anybody know how to do that? thanks in advance ...
proteome alignment protein written 15 months ago by lhernanj0 • updated 15 months ago by h.mon31k
0
votes
1
answer
1.7k
views
1
answers
Answer: A: Why can't import Biopython module when I run my scripts located in /usr/lib/cgi-
... SOLUTION: Removing anaconda from home directory and install it in usr/local. Thus, Apache will have permission to access the environment. a) Remove anaconda with $ rm -rf anaconda3/ b) Re-install anaconda3 in directory /usr/local c) Add the line export PATH='/usr/local/anaconda3/bin:$PATH' to t ...
written 17 months ago by lhernanj0
0
votes
1
answer
1.7k
views
1
answers
Comment: C: Why can't import Biopython module when I run my scripts located in /usr/lib/cgi-
... Ok, I agree. I sent the same question to StackOverflow but nobody answered me with a real solution. ...
written 17 months ago by lhernanj0
0
votes
1
answer
1.7k
views
1
answers
Comment: C: Why can't import Biopython module when I run my scripts located in /usr/lib/cgi-
... I guess that my problem is: I don't know how to share anaconda packages with the user of HTTP server because the HTTP server executes my scripts as user “nobody”. ...
written 17 months ago by lhernanj0

Latest awards to lhernanj

Scholar 17 months ago, created an answer that has been accepted. For A: Why can't import Biopython module when I run my scripts located in /usr/lib/cgi-

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1290 users visited in the last hour