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Comment: Comment: Missing genes in converting "ensembl_gene_id_version" to "ensembl_gene_id" in b
24 months ago by Hamid Ghaedi 3.2k
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Comment: Comment: Missing genes in converting "ensembl_gene_id_version" to "ensembl_gene_id" in b
24 months ago by Hamid Ghaedi 3.2k
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1
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1.7k
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Comment: Comment: [R] Unsupervised hierarchical clustering RNA-seq ?
24 months ago by Hamid Ghaedi 3.2k
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1.1k
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Comment: Comment: Get GO terms for location and filter protein table with Rstudio
24 months ago by Hamid Ghaedi 3.2k
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903
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Comment: Comment: Genotypic and clinical phenotypic feature selection methods for machine learning
24 months ago by Hamid Ghaedi 3.2k
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3.5k
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Comment: Comment: R (tidyr::pivot_wider)
24 months ago by Hamid Ghaedi 3.2k
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1
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3.5k
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Comment: Comment: R (tidyr::pivot_wider)
24 months ago by Hamid Ghaedi 3.2k
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1
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1.1k
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Comment: Comment: Get GO terms for location and filter protein table with Rstudio
24 months ago by Hamid Ghaedi 3.2k
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0
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3.5k
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Comment: Comment: R (tidyr::pivot_wider)
24 months ago by Hamid Ghaedi 3.2k
1
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1
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1.1k
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Answer: Answer: Get GO terms for location and filter protein table with Rstudio
24 months ago by Hamid Ghaedi 3.2k
1
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1
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1.3k
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Answer: Answer: Correlating DNA methylation beta values with Gene expression levels (RNA-seq)
23 months ago by Hamid Ghaedi 3.2k
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904
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Answer: Answer: Gene ontology and GSEA
2.0 years ago by Hamid Ghaedi 3.2k
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1.4k
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Comment: Comment: Transcription Start Site
2.0 years ago by Hamid Ghaedi 3.2k
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0
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638
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Comment: Comment: How can I get the corresponding protein sequence according to the MAF file？
2.0 years ago by Hamid Ghaedi 3.2k
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1
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699
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Comment: Comment: Motif model change to transcription factor
2.0 years ago by Hamid Ghaedi 3.2k
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1
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699
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Comment: Comment: Motif model change to transcription factor
2.0 years ago by Hamid Ghaedi 3.2k
2
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1
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1.5k
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Answer: Answer: how to append numbers to a column using awk and R?
2.1 years ago by Hamid Ghaedi 3.2k
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0
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1.0k
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Comment: Comment: IGV "Cannot find feature or locus" error
2.1 years ago by Hamid Ghaedi 3.2k
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1
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1.1k
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Comment: Comment: DNA methylation analysis for paired samples using random effects model
2.2 years ago by Hamid Ghaedi 3.2k
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1
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715
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Comment: Comment: PCA biplot for SNPs data
2.2 years ago by Hamid Ghaedi 3.2k
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486
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Comment: Comment: Mapping gene coordinates to transcript exons
2.2 years ago by Hamid Ghaedi 3.2k
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1.3k
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Comment: Comment: lncRNA quantification featurecounts
2.2 years ago by Hamid Ghaedi 3.2k
1
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1
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923
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Comment: Comment: TF-gene database
2.2 years ago by Hamid Ghaedi 3.2k
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1
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923
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Comment: Comment: TF-gene database
2.2 years ago by Hamid Ghaedi 3.2k
3
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1
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1.2k
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Answer: Answer: How to apply enrichGO over a list
2.2 years ago by Hamid Ghaedi 3.2k
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0
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993
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Comment: Comment: A chord plot for miRNA IDs by GOplot package
2.2 years ago by Hamid Ghaedi 3.2k
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1.4k
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Comment: Comment: Transcription factors database
2.2 years ago by Hamid Ghaedi 3.2k
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1
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1.4k
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Comment: Comment: Which one? Log2foldchange or t statistic
2.3 years ago by Hamid Ghaedi 3.2k
2
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1
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2.7k
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Answer: Answer: KEGG enrichment dotplot
15 months ago by Hamid Ghaedi 3.2k
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1
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2.1k
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Comment: Comment: Online VEP returns empty columns
2.3 years ago by Hamid Ghaedi 3.2k
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0
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2.1k
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Comment: Comment: Online VEP returns empty columns
2.3 years ago by Hamid Ghaedi 3.2k
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2
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2.1k
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Comment: Comment: Online VEP returns empty columns
2.3 years ago by Hamid Ghaedi 3.2k
6
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8
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2.1k
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Online VEP returns empty columns
ENSEMBL variant-annotation VEP
updated 2.3 years ago by ★ 2.4k • written 2.3 years ago by 3.2k
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1.1k
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Comment: Comment: Ranked gene list. How to continue to do a pathway enrichment analysis
2.3 years ago by Hamid Ghaedi 3.2k
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1
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1.1k
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Comment: Comment: Ranked gene list. How to continue to do a pathway enrichment analysis
2.3 years ago by Hamid Ghaedi 3.2k
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0
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1.3k
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Comment: Comment: RAM for genome index with STAR
2.4 years ago by Hamid Ghaedi 3.2k
1
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0
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1.4k
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Comment: Comment: Problem for converting gene symbol to entrez id
2.3 years ago by Hamid Ghaedi 3.2k
0
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1
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1.4k
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Comment: Comment: Problem for converting gene symbol to entrez id
2.3 years ago by Hamid Ghaedi 3.2k
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0
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775
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Comment: Comment: Error in Heat map
2.4 years ago by Hamid Ghaedi 3.2k
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1
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1.1k
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Comment: Comment: Extracting ENST ids from coordinates
2.4 years ago by Hamid Ghaedi 3.2k
2
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1
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1.5k
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Answer: Answer: Spike proteins sequences of all variants of Covid
2.4 years ago by Hamid Ghaedi 3.2k
1
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0
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928
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Answer: Answer: Transcription factors and gene expression profile
2.4 years ago by Hamid Ghaedi 3.2k
2
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1
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1.4k
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Answer: Answer: Troubles with handling vector data (csv format) in R
2.4 years ago by Hamid Ghaedi 3.2k
1
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1
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3.6k
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Comment: Comment: need some help on how to use DESeq2 for TCGA data
2.4 years ago by Hamid Ghaedi 3.2k
3
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0
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2.0k
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Answer: Answer: Export tukeyHSD result table
2.4 years ago by Hamid Ghaedi 3.2k
1
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0
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1.6k
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Comment: Comment: KEGG pathway modules
2.4 years ago by Hamid Ghaedi 3.2k
1
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0
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1.8k
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Comment: Comment: Generate DNA string
2.4 years ago by Hamid Ghaedi 3.2k
1
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1
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1.6k
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Answer: Answer: KEGG pathway modules
2.4 years ago by Hamid Ghaedi 3.2k
0
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1
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1.0k
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Comment: Comment: Running GO Enrichment on Nanostring Expression Data
2.4 years ago by Hamid Ghaedi 3.2k
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1
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2.0k
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Comment: Comment: Is the current R version (4.1.2) are not suitable for the packages related with
2.4 years ago by Hamid Ghaedi 3.2k
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