User: gregoire.destreel

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New User
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Last seen:
11 months, 2 weeks ago
Joined:
1 year ago
Email:
g****************@uclouvain.be

Posts by gregoire.destreel

<prev • 4 results • page 1 of 1 • next >
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Deseq2 - Log2FoldChange is dependent on the number of genes in the analysis
... Dear users, When I used Deseq2 package on a Count data table, and then applied the `result()` function, the log2FoldChange output of this last table is dependent on the number of genes that I had chosen to put in the analysis in the Count data table. Does someone know why? Thanks ! ...
deseq2 log2foldchange rna-seq written 11 months ago by gregoire.destreel10 • updated 11 months ago by russhh4.7k
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(Closed) The shape of my ... enrichment profile !?
... Dear users, Does someone can explain the curve shape of GSEA analysis enrichement profile? As control of my GSEA analysis with PreRanked data set following Log2FoldChange, I did the same analysis but with Log2FoldChange randomly attributed to genes of my data set. The consequence is that, in the in ...
broad institute rna-seq gsea written 12 months ago by gregoire.destreel10 • updated 12 months ago by WouterDeCoster41k
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The shape of my ... enrichment profile !?
... Dear users, Does someone can explain the curve shape of GSEA analysis enrichement profile? As control of my GSEA analysis with PreRanked data set following Log2FoldChange, I did the same analysis but with Log2FoldChange randomly attributed to genes of my data set. The consequence is that, in the ...
rna-seq written 12 months ago by gregoire.destreel10
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Why all NES values are >0.5
... Dear users, I'm a begginer in GSEA field, however when I performed GSEA analysis comparing my homemade data set sorted by log2FoldChange criteria with genes data set from very different sources, all theses GSEA analysis provides me with NES value above 0,5 ( at least ! And most of the time above ...
rna-seq gsea written 12 months ago by gregoire.destreel10 • updated 12 months ago by Biostar ♦♦ 20

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