User: BioNoobie

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BioNoobie10
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Posts by BioNoobie

<prev • 5 results • page 1 of 1 • next >
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How to use multiple control in Control-FREEC for CNV analysis?
... We have 15 control sample and 30 test sample and want to check copy number variation in test samples. The sequencing method used is ion-torrent PGM, A region in a chromosome is targeted and the whole region is sequenced including intron and intergenic region. Which tool is best to identify CNV i ...
targeted gene sequencing control-freec freec cnv written 7 weeks ago by BioNoobie10
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how to add gene name in cluego?
... I'm trying to add gene names after analyzing the gene list from clueGO plugin. When I try to add the gene names pathway names disappears when I added pathway names from mapping node label genes name disappears. Is there any way to add both gene name and pathway name to the network? ...
cluego network genes cytoscape written 7 months ago by BioNoobie10 • updated 7 months ago by scooter80
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How do I annotate Drug names to Drugbank ATC level 1 classification?
... Hi, I have a list of drug names for which I want to know its ATC classification, I tried to do it manually but the list is huge, is there any tool or script from which I can annotate. Thanks ...
drugbank written 7 months ago by BioNoobie10
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Comment: C: How to calculate differential methylation from TCGA
... I couldn't get the method to calculate, I tried to look into wanderer tool but it takes single gene as input. ...
written 9 months ago by BioNoobie10
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How to calculate differential methylation from TCGA
... How to calculate differentially methylated genes hypomethylated and hypermethylated genes from TCGA normal against tumor data ...
differential tcga methylation illumina beadseq written 9 months ago by BioNoobie10

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