User: anasjamshed1994

Reputation:
60
Status:
Trusted
Location:
Last seen:
3 days, 3 hours ago
Joined:
2 years, 3 months ago
Email:
a**************@gmail.com

Posts by anasjamshed1994

<prev • 104 results • page 1 of 11 • next >
0
votes
0
answers
159
views
0
answers
Comment: C: Gene Prediction by using Python
... i want to do this through python script ...
written 28 days ago by anasjamshed199460
0
votes
0
answers
159
views
0
answers
Comment: C: Gene Prediction by using Python
... this is not assignment my project ...
written 29 days ago by anasjamshed199460
1
vote
0
answers
159
views
0
answers
Gene Prediction by using Python
... I want to implement software(python script) to identify genic regions based on codon usage analysis, specifically codon usage log-likelihood. I have 2 files one is FASTA and another one contains information of codons The following is the general algorithm; 1) Starting at the first base of the DNA ...
fasta codon dna written 29 days ago by anasjamshed199460
0
votes
0
answers
202
views
0
answers
Comment: C: get error in kmer counting in python 3
... how can I run through command line after creating .py file ...
written 5 weeks ago by anasjamshed199460
0
votes
0
answers
171
views
0
answers
Comment: C: SNPs detection through python
... Can anyone plz help me? ...
written 5 weeks ago by anasjamshed199460
0
votes
0
answers
202
views
0
answers
Comment: C: get error in kmer counting in python 3
... yes it's not integer I know but I also tried to do by taking string but it also gimme error ...
written 5 weeks ago by anasjamshed199460
0
votes
0
answers
171
views
0
answers
SNPs detection through python
... I want to create Python programs with the following specifications: Purpose: Given a DNA sequence alignment, print to the screen any positions containing a putative polymorphism (transition, transversion or indel). The threshold for the polymorphic allele is defined by the user. The screen output ...
python snp dna written 5 weeks ago by anasjamshed199460 • updated 5 weeks ago by Alex Reynolds31k
0
votes
0
answers
202
views
0
answers
Comment: C: get error in kmer counting in python 3
... yes I am using python notebook ...
written 5 weeks ago by anasjamshed199460
0
votes
0
answers
202
views
0
answers
get error in kmer counting in python 3
... I want to write a program that 1. calculates the number of all kmers of a given length across all DNA sequences 2. displays just the ones that occur more than a given a number of times. I have tried this script: import os import sys import shutil # convert command line argume ...
fasta python kmer dna written 5 weeks ago by anasjamshed199460 • updated 5 weeks ago by _r_am32k
0
votes
1
answer
194
views
1
answers
Comment: C: Translation from fasta file which contains 6 sequences
... but no output when I run this script although I have one gene with id CUL3B ...
written 5 weeks ago by anasjamshed199460

Latest awards to anasjamshed1994

Commentator 26 days ago, created a comment with at least 3 up-votes. For C: RNA Seq Analysis in R
Centurion 5 weeks ago, created 100 posts.
Popular Question 10 weeks ago, created a question with more than 1,000 views. For One Gene one polypeptide hypothesis
Popular Question 10 weeks ago, created a question with more than 1,000 views. For Python Script to to convert orf gene into protein
Popular Question 22 months ago, created a question with more than 1,000 views. For Python Script to to convert orf gene into protein
Popular Question 22 months ago, created a question with more than 1,000 views. For Python Script to Calculate Total Number of genes

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1295 users visited in the last hour