User: M.O.L.S

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M.O.L.S10
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1 month ago
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1 year, 4 months ago
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Posts by M.O.L.S

<prev • 40 results • page 1 of 4 • next >
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Comment: C: How to calculate the center of mass
... There is no guarantee that that function is correct... ...
written 4 weeks ago by M.O.L.S10
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Comment: C: How to calculate the center of mass
... I think it is the set up for the Kabsch Algorithm or the orthogonal Procrustes problem. Is the centroid and the center of mass the same thing? ...
written 5 weeks ago by M.O.L.S10
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How to calculate the center of mass
... Please can I have some ideas as I just don't get it. We usually come here, after countless Google searches, not as a first resort =) **What is the center of mass of an atomic coordinate of protein? I'd like to program it using biopython** Is there a formula for it? Why is this important? How i ...
python proteins center of mass physics written 5 weeks ago by M.O.L.S10
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Answer: A: What is happening in the Nussinov Algorithm?
... This is a reply, not an answer... I understand the use of j-i +1. Without this the initialisation doesn't make sense. I appreciate your help, Thank you, although it has brought about a few more questions... So I understand that i am comparing 1 RNA sequence with itself. If I was doing an alignme ...
written 10 weeks ago by M.O.L.S10
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Comment: C: How to make a phylogenetic tree set in ASTRAL?
... I don't know any other phylogenetic estimation approaches (programs?), apart from ASTRAL. ...
written 3 months ago by M.O.L.S10
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Comment: C: Execute commands in Bash Chunk in Rmarkdown
... I cant see how I can accept someone else's comment as an answer to my question. =( I can add a reply, add a comment, or moderate ...
written 3 months ago by M.O.L.S10
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Answer: A: Execute commands in Bash Chunk in Rmarkdown
... In an RMarkdown file in Rstudio the following can be applied: For jar files, I haven't figured out how to do it with a short command, but as h.mon says I can use the full path to the program and it will work. for example: ```{bash} # The beagle program java -jar /Users/m.o.l.s/Progr ...
written 3 months ago by M.O.L.S10
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Comment: C: Execute commands in Bash Chunk in Rmarkdown
... Yes. This is true. I have installed programs using Conda, Homebrew, pip install, and downloaded binaries and source files from online and compiled them from github and websites. ...
written 3 months ago by M.O.L.S10
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Comment: C: Execute commands in Bash Chunk in Rmarkdown
... Yes. This 100% works. Thank you so much =). ...
written 3 months ago by M.O.L.S10
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What is happening in the Nussinov Algorithm?
... I am trying to understand the Nussinov Algorithm, and I have a few questions: maybe more. What are i and j. Are they just called this because there are paired with each other? What is K and K + 1 in the bifurcation? What is happening during initialisation? From what I can see, one just puts ...
nussinov algorithm written 3 months ago by M.O.L.S10

Latest awards to M.O.L.S

Scholar 3 months ago, created an answer that has been accepted. For A: How to read an mpileup file from Samtools into Python
Popular Question 9 months ago, created a question with more than 1,000 views. For How to load data into R from an external hard drive?
Scholar 14 months ago, created an answer that has been accepted. For A: How to read an mpileup file from Samtools into Python
Scholar 15 months ago, created an answer that has been accepted. For A: How to read an mpileup file from Samtools into Python

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