User: jzannatun

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jzannatun0
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Posts by jzannatun

<prev • 7 results • page 1 of 1 • next >
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Comment: C: Quality control after genotype imputation
... Thanks a lot! I hope I can finish my work soon. ...
written 7 days ago by jzannatun0
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Comment: C: How Can I Compute The R Square Hat Statistic For Imputed Data?
... Dear Kantale, although it's long after your post, I am interested to see your python script to compute the r square hat metric to assess the quality of the imputation done by Beagle software. The links you gave can not be reached. It would be of great help if you kindly provide those again. Thank y ...
written 11 days ago by jzannatun0
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Comment: C: Quality control after genotype imputation
... Thank you. I am reading the article. ...
written 17 days ago by jzannatun0
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Answer: A: Quality control after genotype imputation
... Dear jean.elbers I have used BEAGLE for imputation ...
written 17 days ago by jzannatun0
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Answer: A: Pi_Hat and pedigree
... Dear RamRS thank you for your reply. I used R to make pedigree tree of family pairs with their given pi_hat value using "igraph" package of R. I will avoid the irrelevant tags next time. ...
written 17 days ago by jzannatun0
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Quality control after genotype imputation
... Can anyone kindly explain me the possible ways of quality control of imputed data? Any reference papers or site describing post imputation quality control would be highly appreciated. I am quite new in this field. I have used BEAGLE for imputation. Thank you in advance. ...
imputation written 17 days ago by jzannatun0
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Pi_Hat and pedigree
... I am new in this field. Can anyone kindly tell me the process of making the pedigree tree of family pairs based on their pi_hat value? Any suggestions of software or programming languages are highly appreciable. Thank you in advance. ...
software error R written 4 months ago by jzannatun0

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