User: Will
Will • 0
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Posts by Will
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... No, my biology teacher is not specialised in bioinformatics, I knew my project would be independently led. Thanks a lot for your help, Kevin! ...
written 2.3 years ago by
Will • 0
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... Hi everyone, sorry about the long query,
Due to my lack of programming background, I've been trying to use MethHC (http://methhc.mbc.nctu.edu.tw/php/search.php?opt=gene) to find the correlation between gene expression and methylation in breast cancer. With MethHC, the user inputs a gene and the cor ...
written 2.3 years ago by
Will • 0
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... Dear Kevin,
Thanks so much for all your replies and help thus far, but as I am not familiar with the workflow, I'm not completely understanding so would you mind providing clarification. Am I supposed to use UCSC data to obtain methylation and expression value in R, then correlate them? Can I also ...
written 2.3 years ago by
Will • 0
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... Hi Devon,
I am looking at a similar exploration to tujuchuanli's. Would you mind explaining what you meant by a per-gene comparisons/what would that look like? ...
written 2.3 years ago by
Will • 0
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... Hi, did you ever find a solution to this? Please help! ...
written 2.3 years ago by
Will • 0
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... Thank you so so much!
However, terribly sorry for ignorance, would this produce a trend line? Or a box plot between normal and tumour tissue? Would I be able to apply chi squared tests and such? Will I be able to simply work with Excel with UCSC? ...
written 2.3 years ago by
Will • 0
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... Hi everyone,
This is my first exposure to bioinformatics, so please bear with me. For a HS assignment, I chose DNA methylation and breast cancer as my topic. I want to explore the correlation between DNA methylation and gene expression in cancer but am overwhelmed with data such as TCGA. Thus I am ...
written 2.3 years ago by
Will • 0
• updated
2.3 years ago by
Kevin Blighe ♦ 71k
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