User: TheCheshireCat

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Posts by TheCheshireCat

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Comment: C: Rsubread: ERROR: cannot finish the SAM file
... It is correct since there is a temporary SAM file in the directory while it is calculating and it works till a cerain point where it throws the error message. For the one organism it was always at 51% (tried it multiple times) and for the other 365% (which is a bit strange). ...
written 13 months ago by TheCheshireCat0
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Rsubread: ERROR: cannot finish the SAM file
... Hello everyone, I want to get the read counts for RNA-Seq data by using the package Rsubread. I got my RNA-Seq data from sra and all other files (genes, genome,...) from NCBI assembly. I tried the following code on 4 different organisms and for 2 it worked perfectly fine but for the other two I got ...
rsubread rna-seq written 13 months ago by TheCheshireCat0

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