User: doramora
doramora • 10
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Posts by doramora
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... Hi
I'm interested in tBLASTn, so I would like to blast some protein sequences on my genome. I was recommended to use Maker. Did you try it and it works? ...
written 7 months ago by
doramora • 10
• updated
7 months ago by
lieven.sterck ♦ 6.8k
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Comment:
C: centos and bowtie2
... ok.
my fault.
thank you ...
written 10 months ago by
doramora • 10
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C: centos and bowtie2
... sorry, but after downloading it still can't work in both of this ways:
> sudo yum install bowtie2
>sudo yum install bowtie2-2.3.5-linux-x86_64
maybe i can't understand the right way of writing path on centos
thank you ...
written 10 months ago by
doramora • 10
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... Hi! Have you ever used Centos 7?(or other versions of Centos)
I wanted to install bowtie2 on it but it writes an error every time i use "sudo yum install bowtie2"
it writes, that it can't find bowtie2, but i've already got tbb-devel.x86_64
please, help, if you have ever worked with Centos, after Ubu ...
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C: samtools view manual
... It is clear! Thank you a lot! My mind feels better) ...
written 10 months ago by
doramora • 10
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C: samtools view manual
... thank you for the website! i have found, that i've got 4 Flag, but i still can't understand, where do i need to use -f ...
written 10 months ago by
doramora • 10
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... Hi! Could you please explain me the differense between -f and -F in samtools view while filtering bam file? ...
written 10 months ago by
doramora • 10
• updated
10 months ago by
Morris_Chair • 170
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... What will write Illumina if my quality will be @@@@? How will it react? Or it'll be possible only if i'll have a null string? ...
written 11 months ago by
doramora • 10
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Comment:
C: bowtie2 tools and reads targeting
... ok, thank you! and when it'll save my reads as .sam i should simply use samtools in terminal, or BBMap has some othee tools to save it in fastqc? ...
written 12 months ago by
doramora • 10
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... Hi! I need to target some reads on my sequence and then i need to pick up reads from there as fastq. has bowtie2 such tools, or i need some other programms to do? ...
written 12 months ago by
doramora • 10
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