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Answer: Answer: VCF filtering with Allele Balance (AB) using FilterVcf (Picard)
11 days ago by GokalpC ▴ 170
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1
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642
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Answer: Answer: Haplotype analysis
11 days ago by GokalpC ▴ 170
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412
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Answer: Answer: HaplotypeCaller Not Detecting Variants
25 days ago by GokalpC ▴ 170
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642
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Answer: Answer: Haplotype analysis
25 days ago by GokalpC ▴ 170
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Answer: Answer: Variant Missing in VCF but Present in BAM Files: Discrepancy Identified via IGV
25 days ago by GokalpC ▴ 170
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Answer: Answer: Manta analysis in WES
27 days ago by GokalpC ▴ 170
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1.4k
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Answer: Answer: No @hd header returned in sam file when running bwa mem
21 months ago by GokalpC ▴ 170
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1.4k
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Comment: Comment: Counting the number of SNPs (VCF) for each genomic coordinates (BED)
3.4 years ago by GokalpC ▴ 170
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3.3k
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Answer: Answer: Recommended mapper
3.4 years ago by GokalpC ▴ 170
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865
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Answer: Answer: Sort a sub column within a column while keeping the feature (LINUX)
3.4 years ago by GokalpC ▴ 170
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1.5k
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Comment: Comment: FASTQ to VCF pipeline question
3.4 years ago by GokalpC ▴ 170
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11k
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Answer: Answer: How to download the Homo_sapiens.GRCh38.100.gtf and Homo_sapiens.GRCh38.dna.prim
3.4 years ago by GokalpC ▴ 170
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2.2k
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Answer: Answer: Freebayes for creating VCF : meaning of QUAL
3.4 years ago by GokalpC ▴ 170
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1.9k
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Answer: Answer: Runs of homozygosity in Plink
3.4 years ago by GokalpC ▴ 170
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3.7k
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Answer: A: How to concatenate four fastq files of NextSeq in linux?
5.2 years ago by GokalpC ▴ 170
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1.3k
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Answer: A: merge VCF single variants G>A and C>A into GC>AA
5.2 years ago by GokalpC ▴ 170
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1
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2.4k
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Answer: A: What does it mean if a gene is not found in an assembly?
5.9 years ago by GokalpC ▴ 170
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1
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3.9k
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Comment: C: variant calling - data from IonTorrent technology
5.9 years ago by GokalpC ▴ 170
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18k
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Comment: C: how to fix the error - Too many open files - by changing code in python3.7
5.9 years ago by GokalpC ▴ 170
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1
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18k
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Comment: C: how to fix the error - Too many open files - by changing code in python3.7
5.9 years ago by GokalpC ▴ 170
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2.7k
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Answer: A: some unrelated info in SAM file generated by BWA
5.9 years ago by GokalpC ▴ 170
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1
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18k
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Answer: A: how to fix the error - Too many open files - by changing code in python3.7
5.9 years ago by GokalpC ▴ 170
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1
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7.7k
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Answer: A: bcl2fastq on Mac
5.9 years ago by GokalpC ▴ 170
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19k
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Answer: A: Issues installing bcl2fastq?
5.9 years ago by GokalpC ▴ 170
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19k
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Comment: C: Issues installing bcl2fastq?
6.2 years ago by GokalpC ▴ 170
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1
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19k
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Comment: C: Issues installing bcl2fastq?
6.2 years ago by GokalpC ▴ 170
1
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3
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19k
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Answer: A: Issues installing bcl2fastq?
6.2 years ago by GokalpC ▴ 170
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