User: rependo

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rependo0
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Posts by rependo

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Comment: C: Need to systematically identify genes within some distance of a response element
... I'm figuring it out as I go, but ideally the output would be a .txt, with columns defined as: 1.) Gene (one per line): all genes located within 100kb of a response element identified in the input 2.) Strand 3.) Gene start position 4.) Gene strand 5.) Response element start position 6.) Response ele ...
written 7 days ago by rependo0
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Comment: C: Need to systematically identify genes within some distance of a response element
... Awesome -- thank you, Alex. ...
written 7 days ago by rependo0
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Need to systematically identify genes within some distance of a response element in the genome
... I'm trying to find a program or script that can be used to systematically return a list of genes in the genome that fall within some specified distance of a response element. I have two files to work with: 1.) A list of predicted response elements in the genome, identified using PoSSuM-search, that ...
genome gene rna-seq written 8 days ago by rependo0 • updated 8 days ago by Alex Reynolds27k

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