User: namea38

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namea380
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Posts by namea38

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Comment: C: Renaming fasta files with chromosomes
... Yeah I'm trying to use the DNA my lab sequenced from a particular region to look for transposons ...
written 5 days ago by namea380
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Comment: C: Renaming fasta files with chromosomes
... I have a bed file I downloaded from the USCS genome browser > chrI 2653 2738 (TAG)n 322 + >chrI 2974 3011 AT_rich 30 + >chrI 3034 3069 AT_rich 21 + ...
written 6 days ago by namea380
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Renaming fasta files with chromosomes
... I have a .fasta file that I'm trying to use `bedtools getfasta` on. When I run it I get the error > WARNING. chromosome (N) was not found in the FASTA file. Skipping. which I think is because my .fasta headers look like this >HWI-D00270:252:CB1D5ANXX:8:1303:19141:48584/1 ACAGCTGATT ...
fasta bedtools chromosome written 6 days ago by namea380

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