User: pauli.pauli

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Getting protein fasta from RNAseq BAM file (human) paying attention on repeats
... Hi everybody, I have several RNAseq BAM files (mapped with BWA and GATK IndelRealigner) of cancer patients of which I should compare if there any copynumber in repeats appeared (whole transcriptome). I need to find a pipeline to find repeats in with our repeat detection software which needs FASTA a ...
rna-seq blastx bam repeats fasta written 3 months ago by pauli.pauli0 • updated 3 months ago by RamRS21k

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