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Posts by linuxborg2
Tutorial: Using Bedtools Closest (closestBed) to make distance histograms of protein binding frequency near all types of pre-RNA junctions (e.g. exon-intron and intron-exon)
... To plot distance histograms of protein binding sites to all types of pre-RNA junctions (intron-exon and exon-intron, etc.), bedtools closest requires post-processing to isolate pertinent information. A batch script that does that post-processing is linked below, and it also uses ngs.plot.r to creat ...
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