User: kushagraprasad24

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Posts by kushagraprasad24

<prev • 12 results • page 1 of 2 • next >
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Comment: C: plink --assoc command gives "NA" for all the analysis (F_A,F_U,A2,CHISQ,P,OR val
... Command i ran :- plink --file input --assoc --out result ...
written 14 hours ago by kushagraprasad240
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Comment: C: plink --assoc command gives "NA" for all the analysis (F_A,F_U,A2,CHISQ,P,OR val
... This is the .map data:- 1 BS00033749_51 -9 13 1 BS00100774_51 -9 13 1 BobWhite_c1361_1187 -9 13 1 GENE-0412_338 -9 13 1 IAAV3919 -9 13 1 RAC875_c42700_264 -9 13 1 Tdurum_contig44888_837 -9 13 1 wsnp_Ex_c10657_17376448 -9 13 1 BS00026456_51 -9 16 1 Excalibu ...
written 15 hours ago by kushagraprasad240
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Comment: C: plink --assoc command gives "NA" for all the analysis (F_A,F_U,A2,CHISQ,P,OR val
... This is the .ped data:- -9 450975 -9 -9 -9 2 A A C C G G C C A A G G T T A A C C C C A A T T A A T T G G A A A A C C G -9 610288 -9 -9 -9 2 0 0 C C G G T T G G G G C C A A T T T T A A T T A A T T G G A A G G T T G -9 41868 -9 -9 -9 3 A A C C G G C C A A G G T T A A C C C C A A T T A ...
written 15 hours ago by kushagraprasad240
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Comment: A: plink --assoc command gives "NA" for all the analysis (F_A,F_U,A2,CHISQ,P,OR val
... Just checking in...has anyone got any solution for this problem? ...
written 3 days ago by kushagraprasad240
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Comment: C: plink --assoc command gives "NA" for all the analysis (F_A,F_U,A2,CHISQ,P,OR val
... This is the .ped file :- https://1drv.ms/u/s!AhjOX4irzvPAon9KV5bbrjSzTvqB This is the .map file :- https://1drv.ms/u/s!AhjOX4irzvPAowCbTXoC_wjCxVc4 You can download the files and try... I Used TASSEL5 to obtain the .map and .ped file from hapmap format. The original convterted files(.map and .ped ...
written 8 days ago by kushagraprasad240
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Comment: C: plink --assoc command gives "NA" for all the analysis (F_A,F_U,A2,CHISQ,P,OR val
... Ok, there are 4 groups in my phenotype. It still doesn't return any results. As you said if there are less samples in a group, plink is not able to perform the statistical tests...whats the alternative for this problem? ...
written 8 days ago by kushagraprasad240
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Comment: C: plink --assoc command gives "NA" for all the analysis (F_A,F_U,A2,CHISQ,P,OR val
... [These are the various phenotype informations...][1] Im working on wheat genome snp's, the phenotypes that i put are for a single trait... [1]: https://imgur.com/a/aHZPFby ...
written 9 days ago by kushagraprasad240
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Comment: C: plink --assoc command gives "NA" for all the analysis (F_A,F_U,A2,CHISQ,P,OR val
... [The New .ped File...][1] [--assoc Result...][2] [1]: https://imgur.com/O1LWNYo [2]: https://imgur.com/YJGTPJv It Still Returns NA's. ...
written 12 days ago by kushagraprasad240
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Comment: C: plink --assoc command gives "NA" for all the analysis (F_A,F_U,A2,CHISQ,P,OR val
... [Screenshot Of The Plink Command][1] [1]: https://imgur.com/lT5BIyn ...
written 13 days ago by kushagraprasad240
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Comment: C: plink --assoc command gives "NA" for all the analysis (F_A,F_U,A2,CHISQ,P,OR val
... [.ped file][1] [.map file][2] [1]: https://imgur.com/VeYQjaY [2]: https://imgur.com/Doz4K5F Sorry I Should Have Done It Earlier. ...
written 13 days ago by kushagraprasad240

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