User: baurumon

gravatar for baurumon
baurumon10
Reputation:
10
Status:
New User
Location:
Last seen:
1 day, 4 hours ago
Joined:
4 months, 1 week ago
Email:
b*******@gmail.com

Posts by baurumon

<prev • 5 results • page 1 of 1 • next >
0
votes
1
answer
80
views
1
answers
Comment: C: Tophat fusion error
... i am running it in cluster and there have plenty of free space . i did check the memory while using. Some sample data working well but other showing this issue. Thank you for other software recommendation but I am going through a specific pipeline. ![enter image description here][1] [1]: http ...
written 4 days ago by baurumon10
0
votes
1
answer
80
views
1
answer
Tophat fusion error
... Hi, I have run Tophat fusion with paired-end RNA-Seq data, but was unsuccessful. The error says running 'long_spanning_reads' . then i split fastq file and run again. unfortunately it is showing same error. could anyone help me in this process!!! My command was -- tophat2 -o tophat_fusion -p 15 --fu ...
software error written 5 days ago by baurumon10 • updated 4 days ago by Kevin Blighe43k
0
votes
0
answers
184
views
0
answers
Comment: C: Error: failed to retrieve right read for pair # 243418 !
... Hi, I used reformat.sh from BBmap with this command: "reformat.sh in1=pair1.fq in2=pair2.fq out1=renamed1.fq out2=renamed2.fq addslash=f int=t " and run again in tophat2 .But unfortunately got the same Error again. Is there some other way to solve it? Thanks in advance Rabbani ...
written 26 days ago by baurumon10
0
votes
0
answers
184
views
0
answers
Comment: C: Error: failed to retrieve right read for pair # 243418 !
... ![enter image description here][1] [1]: http://i65.tinypic.com/b3rhiv.jpg ...
written 29 days ago by baurumon10
1
vote
0
answers
184
views
0
answers
Error: failed to retrieve right read for pair # 243418 !
... ![enter image description here][1] Hi , I am using tophat2 for alignment which is showing "Error: failed to retrieve right read for pair # 243418 !". Then i used BBTools to repair seq data with - "repair.sh in1=broken1.fq in2=broken2 out1=fixed1.fq out2=fixed2.fq outs=singletons.fq repair" but st ...
alignment written 4 weeks ago by baurumon10

Latest awards to baurumon

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1782 users visited in the last hour