User: Michael Barton

gravatar for Michael Barton
Michael Barton1.8k
Reputation:
1,830
Status:
New User
Location:
Akron, Ohio, United States
Website:
http://www.michaelbart...
Last seen:
4 years, 12 months ago
Joined:
7 years, 9 months ago
Email:
m***@michaelbarton.me.uk

Doing post doc in genomics.

Posts by Michael Barton

<prev • 90 results • page 1 of 9 • next >
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Comment: C: Identical Queries On Ncbi Gene And Protein Databases Returns Fewer Results From
... Thanks Neil. I resorted to writing a script to parse the gene out of the protein genbank file then fetch that from the database. ...
written 5.2 years ago by Michael Barton1.8k
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Comment: C: Identical Queries On Ncbi Gene And Protein Databases Returns Fewer Results From
... Many species returned in the protein set are not present in gene set. ...
written 5.2 years ago by Michael Barton1.8k
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Identical Queries On Ncbi Gene And Protein Databases Returns Fewer Results From The Gene Database.
... Possibly a stupid question but I'm not getting the same results for the same query on the NCBI protein database versus with gene database. I get a larger set for the query on the protein DB compared with the same query on the gene DB. I assume that each protein result must have a corresponding gene ...
ncbi database search written 5.2 years ago by Michael Barton1.8k • updated 3 months ago by Biostar ♦♦ 20
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Comment: C: What Are, If Any, The Conventions For Encoding Extra Information In The Gff3 Nin
... Encoding additional genome annotation data in GFF3. Things like product and description. ...
written 5.8 years ago by Michael Barton1.8k
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Comment: C: What Are, If Any, The Conventions For Encoding Extra Information In The Gff3 Nin
... Thanks for suggestion. Are there any common variants of GFF which include this type of information? ...
written 5.8 years ago by Michael Barton1.8k
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What Are, If Any, The Conventions For Encoding Extra Information In The Gff3 Ninth Column?
... The GFF3 format is well specified for describing sequence location and type in the first eight columns. The ninth column is left for specifying any remaining information. I would like to use GFF3 the encode the data typically produced by a genome annotator. How should I go about this? Are there ...
annotation gff written 5.8 years ago by Michael Barton1.8k • updated 5.8 years ago by Neilfws47k
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Comment: C: Should Biostar Be Switched Over To The Stackexchange Network?
... I agree. I think the StackExchange network has benefits such a meta-discussion subdomains and clearer explanations of the additional actions allowed by increased user reputation. ...
written 6.1 years ago by Michael Barton1.8k
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Answer: A: Ngs, What'S New ? "I Am Preparing A Course On Ngs" , An Update For 2011/2012
... I think the assemblathon paper is interesting if you're also covering assembly. ...
written 6.1 years ago by Michael Barton1.8k
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Comment: C: Bioinformatics Career Survey 2011/2012
... Thank you for the useful suggestions so far. Up votes all around. ...
written 6.2 years ago by Michael Barton1.8k
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Comment: C: Bioinformatics Career Survey 2011/2012
... Asking questions about field of undergraduate degree, masters degree, and PhD could determine whether people retrained. ...
written 6.2 years ago by Michael Barton1.8k

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