User: archanaverma433
archanaverma433 • 0
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Posts by archanaverma433
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... I converted fastq file to fasta using the following command -
seqtk seq -aQ64 sample1.fastq > sample1.fasta
but in output - i am getting other words besides A, T , G, C-
for example - W & R
CACACWCAACCCAGGTATGCATGCACATGCACGTCCATCTGCACACTCAACCCAAGCATGTGCACACACRCACACTTGTACACACACACTCAACCCAAG ...
written 15 days ago by
archanaverma433 • 0
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Comment:
C: fastqc: kmer-content failed
... How did you resolve the problem? I have RNA seq data and fastqc reported Adapter Content pass but kmer-content failure. ...
written 5 weeks ago by
archanaverma433 • 0
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... I have to convert the aligned sam file to paf for miniasm. Can anyone suggest any tool? ...
written 6 weeks ago by
archanaverma433 • 0
• updated
21 days ago by
rlorigro • 10
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... EnhancedVolcano(res5,
lab = res5$symbol,
x = 'log2FoldChange',
y = 'padj',
selectLab = rownames(res5)[which(names(keyvals.shape) %in% c('adhesion', 'pluripotent', 'differentiation', 'others'))],
x ...
written 6 months ago by
archanaverma433 • 0
• updated
6 months ago by
Kevin Blighe ♦ 69k
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... Great tool!
I am trying "Custom shape & colour over-ride" , .
i have 4 cell types . can you tell me how to label genes names of different shapes ? ...
written 6 months ago by
archanaverma433 • 0
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