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Posts by mw848
Comment: C: finding novel CNVs
... Hi Pierre, Thank you for your quick response. The excel file I have already has a list of called CNVs and their chromosomal positions. I just want to tally up which samples have the same coordinate (overlapped coordinates) loss or gains. Do I need to compare this BED file to a known CNV BED file t ...
... I have an excel file that consist of 48 separate tumor samples and one control with hundreds of coordinates that have chromosomal losses or gains. I would like to find overlapping coordinates between samples to find novel copy number alterations among the samples. What is the best way to go about th ...
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