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Posts by melissawongukm
... Hi, it seems like the bedtools command has changed. The correct command should be: bedtools coverage -hist -a x.bed -b x.bam Now the file should contain each feature on the bed file plus "all" lines. To make sure all lines contain 7 columns and can be read by R read.table, I added two more col ...
... Thanks for the files. It was a pain to download them from Baidu. They are now available on my dropbox at https://www.dropbox.com/sh/ycvtoner1d2bujs/AACtKzZwsL9ln0vI5Fnxuof0a?dl=0 ...
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