User: silverspanch

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Posts by silverspanch

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CWL limit number of job instances created through scatter
... Is there any way to limit the number of job instances created when scattering a workflow? Right now I have a highly parallelizable workflow that spans into more then 1200 jobs when running in parallel, which is way to many for a single server to handle at once, and I end up getting a bunch of MAX_TH ...
queue scatter cwl resource management written 5 days ago by silverspanch0 • updated 4 days ago by Michael R. Crusoe1.4k
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Comment: C: CWL join two dimensional file array output
... Thanks, I didnt know about this functionality. ...
written 5 days ago by silverspanch0
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CWL join two dimensional file array output
... I have a CWL workflow that scatters a list of variables over a nested workflow which returns a file array. The output is then an array of file arrays, but it needs to be flattened for the next step. How do I gather the inputs from one step, and join the multidimensional file array into a single flat ...
workflow cwl scatter written 12 days ago by silverspanch0 • updated 10 days ago by Tom240

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