User: daren.card

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daren.card10
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Posts by daren.card

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Comment: C: Using 10X Chromium linked reads for genome gap-filling
... Thanks for the reply. Makes sense. I was just hoping it would be possible to somehow leverage the local assemblies from the linked reads. Seems like it would work better to map and extend using >10 kb "reads" vs. just 150 bp ones. ...
written 9 days ago by daren.card10
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Using 10X Chromium linked reads for genome gap-filling
... I have about 75x coverage of 10X Genomics Chromium data for a non-model reptile species. I've used this to produce a genome assembly using Supernova and am currently using similar coverage of Hi-C data to scaffold. I expect this scaffolding process to result in assembly gaps of various lengths beyon ...
genome assembly written 10 days ago by daren.card10 • updated 10 days ago by harish200

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