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Posts by daren.card
... Thanks for the reply. Makes sense. I was just hoping it would be possible to somehow leverage the local assemblies from the linked reads. Seems like it would work better to map and extend using >10 kb "reads" vs. just 150 bp ones. ...
... I have about 75x coverage of 10X Genomics Chromium data for a non-model reptile species. I've used this to produce a genome assembly using Supernova and am currently using similar coverage of Hi-C data to scaffold. I expect this scaffolding process to result in assembly gaps of various lengths beyon ...
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