User: jbt38

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jbt380
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Posts by jbt38

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Comment: C: Trimming an alignment in R
... Legend, thanks for this - especially remembering what you did from so long ago! ...
written 6 months ago by jbt380
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Comment: C: Trimming an alignment in R
... Hi Gon, how did you then write the subset to a new fasta file, without losing the fasta structure? ...
written 6 months ago by jbt380
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How do I extract locus-position information from XMFA file? Start-end positions of each locus.
... I have an XMFA alignment of >400 taxa, with 2,000 loci. I need to find where each locus begins and ends, as in a partition file. Next step I will extract the single-locus alignments for dN/dS from the fasta-version of this genome alignment. Is there a quick way to find start-end positions for ...
genome alignment sequence xmfa fasta written 6 months ago by jbt380 • updated 6 months ago by massa.kassa.sc3na170

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