User: a.lathifbt

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a.lathifbt0
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Posts by a.lathifbt

<prev • 6 results • page 1 of 1 • next >
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Comment: C: ORF reading in Python
... Yes, it's helpful and it answer the question. ...
written 4 weeks ago by a.lathifbt0
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Comment: C: ORF reading in Python
... Thank you so much. I wasn't familiar with yield function. It's helpful :) ...
written 5 weeks ago by a.lathifbt0
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Comment: C: ORF reading in Python
... Thank you. It is working now. But the issue I am facing now is it's reading only one orf per sequence and if it finds the first one, it stops checking for more. presence of more than ORF per sequence and the second on being longer than the first is complicating the problem. any idea how to overcome ...
written 5 weeks ago by a.lathifbt0
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ORF reading in Python
... I am trying to read ORF from a list of sequences and identify the one with maximum length and correspond it to the sequence and the reading frame it belongs to as the output. I wrote the code and it's not quite working properly. def startstop_codon(dna,frame): """ TO CHECK THE PRESENCE ...
gene sequence written 5 weeks ago by a.lathifbt0 • updated 5 weeks ago by a.zielezinski8.7k
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Comment: C: BLAST using Biopython
... Thank you so much! rectified the issue and it's working now. ...
written 5 weeks ago by a.lathifbt0
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BLAST using Biopython
... Hello.I am new to biopython and I am trying to do BLAST search for a single query sequence. This is the script I wrote: """ BLAST OVER INTERNET """ from Bio.Blast import NCBIWWW file_name=input("enter the file name:") filename = open(file_name).read() result=NCBIWWW.qblast("blas ...
gene alignment written 5 weeks ago by a.lathifbt0

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