User: Sael

gravatar for Sael
Sael20
Reputation:
20
Status:
New User
Location:
KSA/Tabuk
Last seen:
1 month, 3 weeks ago
Joined:
1 year, 6 months ago
Email:
s********@gmail.com

Posts by Sael

<prev • 4 results • page 1 of 1 • next >
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Comment: C: trackplot: Fast and minimal dependency standalone R script to generate IGV style
... Problem solved using: git clone https://github.com/CRG-Barcelona/libbeato.git git clone https://github.com/CRG-Barcelona/bwtool.git cd libbeato/ ./configure git checkout 0c30432af9c7e1e09ba065ad3b2bc042baa54dc2 make sudo make install cd ../bwtool/ ./configure ...
written 7 weeks ago by Sael20
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Comment: C: trackplot: Fast and minimal dependency standalone R script to generate IGV style
... I just added it to PATH. Still I get the same error. ...
written 7 weeks ago by Sael20
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Comment: A: trackplot: Fast and minimal dependency standalone R script to generate IGV style
... Hi I tried your script to make the plots but got an error Parsing loci.. Queried region: chr1:202717141-202817514 [100373 bps] Checking for files.. Error in .check_bwtool() : Could not locate bwtool. Download it from here: https://github.com/CRG-Barcelona/bwtool/releases Th ...
written 7 weeks ago by Sael20
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Tutorial: Calculation of TSS Scores for ATAC-seq Data
... Hello Everyone, I want to share with you guys my method for the calculation of TSS scores for ATAC-seq data. I am new to bioinformatics and I learned so much from this place. You can do the calculation in R (ATACqc package) but it is very fast doing it in UNIX command line. I used ENCODE definit ...
tutorial next-gen sequencing written 18 months ago by Sael20

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Popular Question 16 months ago, created a question with more than 1,000 views. For Calculation of TSS Scores for ATAC-seq Data

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