User: uvika85

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uvika850
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Posts by uvika85

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Partial Least square discriminant analysis( PLS-DA)
... hi.. could anyone help me to understand PLS-DA. what is loading value and VIP scores? I don't have any statistics background Thanks ...
statistics written 9 months ago by uvika850 • updated 9 months ago by Kevin Blighe61k
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Comment: C: kruskall wallis test
... I could not (unavoidable circumstances), thats why asking the most probable platform I know ...
written 9 months ago by uvika850
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kruskall wallis test
... hi, I am working on a metagenomics project. The company provides me one table which says like this.... ***********ALPHA DIVERSITY STATS-----KRUSKAL WALLIS PAIRWISE COMPARISON*********** Group1 Group2 Chao1 Goods coverage observed OTUs ...
statistics written 9 months ago by uvika850 • updated 9 months ago by h.mon30k
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Comment: C: SortMeRNA for multiple reads file
... Hi, I am very hopeful that you will sort my problem. I am having multiple files for analysis. I am running sortMeRNA with the command below. sortmerna --ref ./rRNA_databases/silva-arc-23s-id98.fasta,./index/silva-arc-23s-id98.db:./rRNA_databases/silva-bac-23s-id98.fasta,./index/silva-bac-23s-id98. ...
written 11 months ago by uvika850
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Comment: A: Run merge-paired-reads script for multiple files at the same time (SortMeRNA)
... Hi, could you please share the dummy code which I can relate to, for the whole workflow (uncompressing, merging,sortMeRNA, unmerging). as I am a newbie for programming. I have the same problem. Thanks in advance. ...
written 11 months ago by uvika850
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Comment: C: SortMeRNA for multiple reads file
... ok. thank you soo much . I will try that. ...
written 11 months ago by uvika850
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Comment: C: SortMeRNA for multiple reads file
... well, I know similar question being answered many time. I wanted to know that if I can process it without bash scripting. because don't know anything about bash Thanks ...
written 11 months ago by uvika850
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SortMeRNA for multiple reads file
... Hi, I wanted to run SortMeRNA for multiple reads file. but as I know SortMeRNA handles only single file at once. Although it is working on a single fastq file, I wanted to run it on my whole folder which consists of 59 fastq file. I don't know anything about bash. can anybody help me? sortmer ...
rna-seq written 11 months ago by uvika850 • updated 11 months ago by h.mon30k

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