User: userlee7655

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Posts by userlee7655

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Comment: C: Calculating each gene's mean of intron length
... Dear Pierre Lindenbaum, Since I am not a bioinformatician, if the following questions are really annoyed you, I think I should apologize first. If I understand your code right, you operate these code under Linux. The first line of code is to download the GTF file. And the second line is how you appl ...
written 18 days ago by userlee76550
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Comment: A: Calculating each gene's mean of intron length
... Thank for you two give me such good solution. Give me some time, I will try it both. I am not familiar with JAVA script and perl but I will try my best. Thank you all again, I even did not expect such fast respond. Sincerely ...
written 18 days ago by userlee76550
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Calculating each gene's mean of intron length
... Hi, I want to calculate the mean of intron length of each gene in mouse(mm10) or human(hg19 or hg38). The rationale of doing this is trying to categorize genes into 4 or 5 bins based on their intron length. As the previously published paper "https://www.ncbi.nlm.nih.gov/pubmed/21358643", in Table 1, ...
genome gene rna-seq sequencing written 19 days ago by userlee76550

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