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Posts by kbmohamed1
Comment: C: Is GRCh38.p13 same as GRCh38 v97?
... Yes, you're right. Reference genome is from NCBI. Somehow, SeqMonk is generating that warning above which I am not quite sure why. Mapping of my samples to the NCBI reference seems to be okay I think with average bout 80% successful mapping. ...
... Hi. I'm struggling with importing data into SeqMonk, I think it might be an issue with the assembly used in SeqMonk which doesn't work with the reference genome that I indexed and used for mapping. Using Subread, my index was built upon this [fasta of GRCh38] which says its the latest genomic fn ...
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