User: vibhanim.21

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vibhanim.2140
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Location:
Manipal University
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Last seen:
5 years, 6 months ago
Joined:
6 years, 11 months ago
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Posts by vibhanim.21

<prev • 14 results • page 1 of 2 • next >
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How To Find Hydrophobic And Hydrophilic Regions In Protein?
... I have a protein. I want to analyse whether the tryptophan and tyrosin molecules fall in hydrophobic or hydrophilic region of my protein. please can anybody help me in this? ...
software analysis protein written 6.3 years ago by vibhanim.2140 • updated 10 months ago by Biostar ♦♦ 20
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Comment: C: Do I Need To Perform Scaffolding For Reference Based Assembly Result ?
... thank you i will try scaffolding within itself . ...
written 6.4 years ago by vibhanim.2140
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Comment: C: Do I Need To Perform Scaffolding For Reference Based Assembly Result ?
... i have no idea why... is this a bad result ? ...
written 6.5 years ago by vibhanim.2140
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Comment: C: Do I Need To Perform Scaffolding For Reference Based Assembly Result ?
... the length of my contig is 2693504 bp and that of reference is 2692570 bp . i think this is good ... ...
written 6.5 years ago by vibhanim.2140
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Do I Need To Perform Scaffolding For Reference Based Assembly Result ?
... i had performed reference assembly using MIRA and had got only one single contig. now i have a doubt whether should i perform scaffolding for my data.. ? ...
assembly reference scaffolding written 6.5 years ago by vibhanim.2140 • updated 6.5 years ago by Michael Dondrup46k
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Comment: C: How To Blast Multiple Contigs To The Reference Database?
... thank you i tried the above...and got the results.. ...
written 6.5 years ago by vibhanim.2140
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How To Blast Multiple Contigs To The Reference Database?
... i have multiple contigs in fasta format after assembling the reads. i also have 33 reference genome sequences. i want to blast the query sample sequence to my reference sequences as well as the plasmID database to find the plasmid regions. but is there any other way i can find similarity between the ...
assembly next-gen blast alignment written 6.5 years ago by vibhanim.2140 • updated 6.5 years ago by Sandeep250
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Can Bio-Linux Be Upgraded ?
... I find that Bio-Linux works like Ubuntu 10.04 version. whenever it asks for upgrade it does not upgrade saying that the third-party software is disabled. I don't get where this third-party software is and what are those. can anyone please suggest how can I upgrade ? ...
deleted-post written 6.6 years ago by vibhanim.2140 • updated 6.6 years ago by Michael Dondrup46k
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Answer: A: Normalization And Differential Expression From Array With Small Samples
... I have not worked on this platform before, but had done a similar experiment of comparing the 2 data sets. All I did was plotted the MA plots and the quantile normalization. performing t-test had helped a lot and was later compared. ...
written 6.6 years ago by vibhanim.2140
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Comment: C: How And From Where Do I Download Reference Genome For Staphylococcus Aureus?
... welcome... i later had thought to be more specific in asking my question.. and thank you for the answer it was very helpful ...
written 6.6 years ago by vibhanim.2140

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