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Posts by chichaochen
Comment: A: Question about featureCounts
... Thanks for the replies. To deal with the overlapping issue as pointed out by you guys, i tried to split the count equally to all overlapping features by : 1.featureCounts -p -O --fraction -t exon -g gene_id 2.featureCounts -p -O --fraction -t gene -g gene_id I still saw some genes Counts ...
... Hi: I was trying featureCounts for with these 2 following settings. 1. featureCounts -t exon -g gene_id (the rest default, not specified) 2. featureCounts -t gene -g gene_id (the rest default, not specified) I expected to see more reads (fragments) in condition 2, since the region of " ...
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