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Comment:
Comment: User friendly (visual&interactive) VCF/BCF mining tools (2021)
2.6 years ago by
desouzareis.r
▴ 280
0
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1
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2.7k
views
Comment:
Comment: User friendly (visual&interactive) VCF/BCF mining tools (2021)
2.6 years ago by
desouzareis.r
▴ 280
0
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1
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1.1k
views
Comment:
Comment: Annotate Structural variants with population specific allele frequency values
2.6 years ago by
desouzareis.r
▴ 280
1
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1
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1.4k
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Comment:
Comment: How does one harmonize WGS data with Microarray data?
2.6 years ago by
desouzareis.r
▴ 280
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1.5k
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Comment:
Comment: GIAB Benchmark (High Confidence) Bed Filles
2.6 years ago by
desouzareis.r
▴ 280
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2
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1.5k
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Comment:
Comment: GIAB Benchmark (High Confidence) Bed Filles
2.6 years ago by
desouzareis.r
▴ 280
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0
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671
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Comment:
Comment: Precision of variant calling (INDELs)
3.0 years ago by
desouzareis.r
▴ 280
0
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1
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1.4k
views
Comment:
Comment: GATK no "SB" annotation after GenotypeGVCFs
3.0 years ago by
desouzareis.r
▴ 280
1
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0
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1.3k
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Comment:
Comment: A simple question about UCSC genome browser
3.1 years ago by
desouzareis.r
▴ 280
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0
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987
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Comment:
Comment: search of genomic annotation databases
3.1 years ago by
desouzareis.r
▴ 280
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0
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625
views
Comment:
Comment: Question about the DbSNP reference vcfs
3.1 years ago by
desouzareis.r
▴ 280
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0
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1.5k
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Comment:
Comment: Selecting genotypes for a specific chromosome belonging to a specific patient fr
3.1 years ago by
desouzareis.r
▴ 280
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0
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699
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Comment:
C: Deletions together with SNVs on BAM files
3.1 years ago by
desouzareis.r
▴ 280
0
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1
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1.1k
views
Comment:
C: Lengths of UTR3, UTR5 and ORF from gtf file
3.1 years ago by
desouzareis.r
▴ 280
0
votes
1
reply
770
views
Comment:
C: Discrepancy between Genome Browser hg19 phyloP Score and that of wig data
3.1 years ago by
desouzareis.r
▴ 280
0
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1
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787
views
Comment:
C: How to make paired-end sequencing multi-mapping reads have only the optimal two
3.1 years ago by
desouzareis.r
▴ 280
0
votes
1
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2.2k
views
Comment:
C: IDT xGen Exome Research Panel v2 vs Twist Human exome core
3.1 years ago by
desouzareis.r
▴ 280
0
votes
0
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943
views
Comment:
C: Cheat Sheet for NGS data analysis
3.1 years ago by
desouzareis.r
▴ 280
0
votes
1
reply
5.7k
views
Comment:
C: How to keep only Biallelic SNP in vcf
3.1 years ago by
desouzareis.r
▴ 280
0
votes
1
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5.7k
views
Comment:
C: How to keep only Biallelic SNP in vcf
3.1 years ago by
desouzareis.r
▴ 280
0
votes
0
replies
2.9k
views
Comment:
C: How to convert plink data from 38th assembly to 37
3.1 years ago by
desouzareis.r
▴ 280
0
votes
1
reply
717
views
Comment:
C: refGene Python Api
3.1 years ago by
desouzareis.r
▴ 280
1
vote
0
replies
657
views
Comment:
C: how to get the best alignment from the sam file
3.1 years ago by
desouzareis.r
▴ 280
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votes
0
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1.8k
views
Comment:
C: Generate consensus from contig alignment to reference sequence
3.1 years ago by
desouzareis.r
▴ 280
1
vote
0
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1.3k
views
Comment:
C: Difference between read depth, allelic depth and bam readcounts
3.1 years ago by
desouzareis.r
▴ 280
2
votes
0
replies
2.0k
views
Comment:
C: Effect of removing secondary/supplementary alignments from BAM file?
3.1 years ago by
desouzareis.r
▴ 280
1
vote
2
replies
950
views
Comment:
C: extract region.txt from bam file
3.1 years ago by
desouzareis.r
▴ 280
1
vote
1
reply
972
views
Comment:
C: chr20_KI270871v1_alt in HG38 Broad Variant and Blacklist regions
3.1 years ago by
desouzareis.r
▴ 280
0
votes
1
reply
992
views
Comment:
C: qiaseq panel fastq to vcf
3.1 years ago by
desouzareis.r
▴ 280
1
vote
2
replies
992
views
Comment:
C: qiaseq panel fastq to vcf
3.1 years ago by
desouzareis.r
▴ 280
0
votes
0
replies
463
views
Comment:
C: How will the fusion sequence looks like in RNA level
3.1 years ago by
desouzareis.r
▴ 280
1
vote
1
reply
676
views
Comment:
C: Minimum overlap when comparing BED files
3.1 years ago by
desouzareis.r
▴ 280
0
votes
0
replies
697
views
Comment:
C: Query regarding variant calling and reporting
3.1 years ago by
desouzareis.r
▴ 280
1
vote
0
replies
891
views
Comment:
C: Data access through python
3.1 years ago by
desouzareis.r
▴ 280
1
vote
0
replies
764
views
Comment:
C: how to determine low quality variants in vcf files
3.1 years ago by
desouzareis.r
▴ 280
0
votes
1
reply
697
views
Comment:
C: Query regarding variant calling and reporting
3.1 years ago by
desouzareis.r
▴ 280
0
votes
0
replies
468
views
Comment:
C: tool for visualizing small sets of genes
3.2 years ago by
desouzareis.r
▴ 280
0
votes
0
replies
668
views
Comment:
C: Common SNPs (UCSC genome browser)
3.2 years ago by
desouzareis.r
▴ 280
0
votes
0
replies
2.9k
views
Comment:
C: Is there any method to convert a text file to VCF format?
3.2 years ago by
desouzareis.r
▴ 280
1
vote
1
reply
11k
views
Comment:
C: Correct way to calculate VAF (Variant allele fraction) from a VCF file
3.2 years ago by
desouzareis.r
▴ 280
0
votes
0
replies
973
views
Comment:
C: fastqc report and quality check
3.2 years ago by
desouzareis.r
▴ 280
0
votes
0
replies
961
views
Comment:
C: which tool should be used to call the genotype?
3.2 years ago by
desouzareis.r
▴ 280
0
votes
0
replies
1.6k
views
Comment:
C: Converting Bigwiggle (.bw) to bed
3.2 years ago by
desouzareis.r
▴ 280
1
vote
0
replies
2.0k
views
Comment:
C: Append characters to end of fasta sequences in a multifasta file
3.2 years ago by
desouzareis.r
▴ 280
0
votes
0
replies
1.6k
views
Comment:
C: Convert processed bam file to fastq
3.2 years ago by
desouzareis.r
▴ 280
0
votes
0
replies
1.0k
views
Comment:
C: Splitting info field in Annovar's multianno.txt file
3.2 years ago by
desouzareis.r
▴ 280
0
votes
0
replies
6.3k
views
Comment:
C: Samtools bam2fq converting bam file to fastq. What happens to unmapped reads?
3.2 years ago by
desouzareis.r
▴ 280
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